Biomics

The article is dedicated to the memory of Rinat Ismagilovich Ibragimov (1956–2018), doctor Grand PhD in Biological Sciences, Professor of Bashkir State University (BashSU). For 12 years, R.I. Ibragimov was a Dean of the Faculty of Biology, for a long time he headed the Department of Biochemistry and Biotechnology. He was a talented scientist, teacher and leader, the organizer of major scientific events at the Faculty of Biology of BashSU. Scientific researches of Ibragimov R.I. were devoted to the study of molecular mechanisms of interaction of plants with phytophagous and pathogens. He obtained priority data on the biochemical characteristics of insect pests in the agroecosystems of the Republic of Bashkortostan, studied varietal characteristics of cultivated plants due to their resistance to pests. Laboratory methods for determining the activity of enzymes, methods of digital data processing in experiments on the quantitative determination of the activity of hydrolases and their inhibitors has been developed. Followers of Professor R.I. Ibragimov continue the development of his scientific ideas. In September 2020, the III Russian Conference "Modern Problems of Biochemistry, Genetics and Biotechnology" dedicated to the memory of Professor Ibragimov R.I. is scheduled to be held at Bashkir State University in Ufa.

Rinat Ismagilovich Ibragimov; Bashkir State University; scientific heritage; Faculty of Biology; Department of Biochemistry and Biotechnology, hydrolytic enzymes, plant resistance

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5.Ibragimov R.I. Belkovye ingibitory proteoliticheskikh fermentov i ikh rol' v formirovanii gomeostaticheskikh reaktsii u rastenii: avtoreferat dis. ... doktora biologicheskikh nauk: 03.00.04. Ufa. 1999. 249 c. [Protein inhibitors of proteolytic enzymes and their role in the formation of homeostatic reactions in plants] (In Russian)

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7.Ibragimov R.I. Izuchenie aktivnosti i geterogennosti ingibitorov proteinaz u zlakov: Dissertatsiya ... kandidata biologicheskikh nauk: 03.00.04. Moskva. 1987. 140 s. [Studying of activity and heterogeneity of proteinase inhibitors in cereals] (In Russian)

8.Ibragimov R.I. Pervyi rabochii den' na nauchnom poprishche (iz tsikla «Nostal'zhi»). Biomika. 2012. T. 3. Spetsial'nyi vypusk elektronnogo zhurnala. S. 175−177. [The first working day in the scientific field (from the cycle "Nostalgie")] (In Russian)

9.Ibragimov R.I., Akhmetov R.R., Khabibullin S.I. Sposob opredeleniya aktivnosti proteoliticheskikh fermentov. Patent na izobretenie RU 2175134 C1. 20.10.2001. [Method for determining the activity of proteolytic enzymes] (In Russian)

10. Ibragimov R.I., Fazlytdinov M.F., Tsvetkov V.O., Shpirnaya I.A. Instrument kolichestvennoi otsenki aktivnosti amiloliticheskikh fermentov i ingibitorov amilaz po ploshchadi zony gidrolizovannogo krakhmala, immobilizovannogo v gel' agarozy. Svidetel'stvo o
registratsii programmy dlya EVM RU 2015612790. 26.02.2015. [A tool for the quantitative assessment of the activity of amylolytic enzymes and amylase inhibitors by the area of the zone of hydrolyzed starch immobilized in an agarose gel] (In Russian)

11. Ibragimov R.I., Shpirnaya I.A. Praktikum po kursu «Biofizika». Ufa: RITs BashGU. 2007. 42 s. [Workshop on the course "Biophysics"] (In Russian)

12. Ibragimov R.I., Shpirnaya I.A., Tsvetkov V.O. Radiatsionnaya ekologiya (uchebnoe posobie). Ufa: RITs BashGU. 2015. 124 s. [Radiation ecology (textbook)] (In Russian)

13. Ibragimov R.I., Shpirnaya I.A., Tsvetkov V.O., Yarullina L.G. Obmen belkov i aminokislot (uchebnoe posobie). Ufa: RITs BashGU. 2016. 91 s. [Protein and amino acid metabolism] (In Russian)

14. Ibragimov R.I., Tsvetkov O.V., Shpirnaya I.A., Mardanshin I.S., Yarullina L.G. Vliyanie pishchevogo substrata na aktivnost' gidrolaz koloradskogo zhuka. Izvestiya Ufimskogo nauchnogo tsentra RAN. 2018. № 3 (4). S. 29−34. [Influence of food substrate on the activity of hydrolases of the Colorado potato beetle] (In Russian)

15. Ibragimov R.I., Tsvetkov V.O., Shpirnaya I. A., Mardanshin I.S., Benkovskaya G.V., Yarullina L.G. Inhibitors of proteinases and necrotic reactions in the potato leaves reduce the reproductive potential of the Solorado potato beetle. Research Journal of Pharmaceutical Biological and Chemical Sciences. 2015. № 6 (5). P.703−708.

16. Ibragimov R.I., Tsvetkov V.O., Shpirnaya I.A. Instrument opredeleniya fermentativnoi aktivnosti po intensivnosti pyaten na zimogrammakh. Svidetel'stvo o registratsii programmy dlya EVM RU 2015661375. 26.10.2015. [A tool for determining enzymatic activity by the intensity of spots on zymograms] (In Russian)

17. Ibragimov R.I., Tsvetkov V.O., Shpirnaya I.A., Mardanshin I.S., Valiakhmetova K.I., Yarullina L.G. Characterization of proteinases of the Colorado potato beetle and their inhibitors from Solanaceae plants. Research Journal of Pharmaceutical, Biological and Chemical Sciences. 2015, № 6 (5). R. 405−411.

18. Ibragimov R.I., Yakovlev V.G., Akhmetov R.R. Opredelenie aktivnosti ingibitorov v sostave kompleksa s proteinazoi. Fiziologiya i biokhimiya kul'turnykh rastenii. 1987. № 1. S. 51-54. [Determination of the activity of inhibitors in the complex with proteinase] (In Russian)

19. Ibragimov R.I., Yamaleeva A.A., Talipov R.F., Kulagin A.A. Fiziologo-biokhimicheskie mekhanizmy deistviya ekologicheski bezopasnykh preparatov dlya rastenievodstva. Uspekhi sovremennogo estestvoznaniya. 2003. № 10. S. 38−39. [Physiological and biochemical mechanisms of action of environmentally friendly drugs for plant growing] (In Russian)

20. Ibragimov R.I., Yarullina L.G. Aktivnost' fenilalaninammiak-liazy i ingibitorov proteoliticheskikh fermentov v prorostkakh pshenitsy pri septorioze. Fiziologiya i biokhimiya kul'turnykh rastenii. 2000. T. 32. S. 223-225. [Activity of phenylalanine ammonia-lyase and inhibitors of proteolytic enzymes in wheat seedlings with septoria disease] (In Russian)

21. Ibragimov R.I., Yarullina L.G., Akhmetov R.R. Aktivnost' svobodnykh i svyazannykh ingibitorov proteinaz v prorostkakh pshenitsy pri porazhenii kornevoi gnil'yu. Sel'skokhozyaistvennaya biologiya. 2000. № 3. S. 89−92. [Activity of free and bound proteinase inhibitors in wheat seedlings with root rot infection] (In Russian)

22. Ibragimov R.I., Yarullina L.G., Shpirnaya I.A. Ustoichivost' rastenii k patogennym organizmam: metody issledovanii. Ufa: RITs BashGU. 2010. 112 s. [Plant resistance to pathogenic organisms: research methods] (In Russian)

23. Khabibullin S.I. Aktivnost' ingibitorov ekzogennykh proteinaz v klubnyakh i list'yakh kartofelya v svyazi s ustoichivost'yu k koloradskomu zhuku :  avtoreferat dis. ... kandidata biologicheskikh nauk: 03.00.12. Ufa. 2003. 22 s. [Activity of inhibitors of exogenous proteinases in potato tubers and leaves in connection with resistance to the Colorado potato beetle] (In Russian)

24. Kuluev B.R. Novye promotory kaulimovirusov i konstruirovanie ikh khimernykh form: avtoreferat dis. ... kandidata biologicheskikh nauk: 03.00.04, 03.00.03. Ufa. 2007. 22 s. [New promoters of caulimoviruses and the construction of their chimeric forms] (In Russian)

25. Kuluev B.R., Chemeris A.V., Ibragimov R.I. Poisk kaulimovirusov na territorii Respubliki Bashkortostan i issledovanie ikh polnogenomnykh promotorov. Vestnik Bashkirskogo universiteta. 2007. T. 12(2). S. 24−26. [Search for caulimoviruses on the territory of the Republic of Bashkortostan and study of their genome-wide promoters] (In Russian)

26. Kuluev B.R., Chemeris A.V., Il'yasova A.A., Ibragimov R.I. Primenenie amplifikatsii po tipu katyashchegosya kol'tsa i DNK-hafflinga dlya geneticheskoi rekombinatsii promotornykh posledovatel'nostei s nizkim urovnem gomologii. Vestnik Bashkirskogo universiteta. 2008. T. 13(1). S. 39−42. [Application of rolling ring amplification and DNA shuffling for genetic recombination of promoter sequences with a low level of homology] (In Russian)

27. Mardanshin I.S., Ibragimov R.I., Umarov I.A., Ben'kovskaya G.V., Udalov M.B. Traditsionnaya selektsiya – ekologichnyi metod resheniya problemy zashchity kartofelya ot koloradskogo zhuka. Agrarnoe reshenie. 2010. № 4. S.32−33. [Traditional breeding is an environmentally friendly method for solving the problem of protecting potatoes from the Colorado potato beetle] (In Russian)

28. Melent'ev A.I., Yamaleev A.M., Ibragimov R.I., Isaev R.F. Srodstvo k uglevodam i lektinopodobnaya aktivnost' ingibitorov tripsina iz semyan pshenitsy v svyazi s ustoichivost'yu k fitopatogennym gribam. Sel'skokhozyaistvennaya biologiya. 1986. T. 21(12). S. 52−54. [Affinity for carbohydrates and lectin-like activity of trypsin inhibitors from wheat seeds in connection with resistance to phytopathogenic fungi] (In Russian)

29. Nalyan A.G. Vliyanie ekologicheskikh faktorov na kachestvennyi i kolichestvennyi sostav mikrobioty v pochvakh razlichnykh tipov landshafta: avtoreferat dis. ... kandidata biologicheskikh nauk: 03.02.08. Ufa. 2010. 23 s. [The influence of environmental factors on the qualitative and quantitative composition of the microbiota in soils of various types of landscape] (In Russian)

30. Nalyan A.G., Van Klei D., Ibragimov R.I., Martynova Van Klei A. Uroven' vidovogo raznoobraziya soobshchestv vezikulo-rbuskulyarnykh gribov v rizosfere Shasmanthium sessiliforum (Roir.) yates i Sallicarpa americana. Vestnik Orenburgskogo gosudarstvennogo universiteta. 2009. № 6 (100). S. 269−271. [The level of species diversity of vesiclearbuscular fungi communities in the rhizosphere of Сhasmanthium sessiliforum (Poir.) Yates and Сallicarpa americana] (In Russian)

31. Petrov V.V., Ibragimov R.I. Vliyanie tochechnykh zamen ostatkov Asp-714 i Asp-720 na strukturu i funktsionirovanie N+-ATF-azy plazmalemmy drozhzhei. Prikladnaya biokhimiya i mikrobiologiya. 2014. T. 50(5). S. 508-516. [Influence of point substitutions of residues Asp-714 and Asp-720 on the structure and functioning of H + -ATPase of yeast plasmalemma] (In Russian)

32. Shevchenko N.D. Aktivnost' gidroliticheskikh fermentov i ikh ingibitorov v tkanyakh kartofelya i koloradskogo zhuka: metodicheskie aspekty : avtoreferat dis. ... kandidata biologicheskikh nauk: 03.01.05. Ufa. 2010. 19 s. [Activity of hydrolytic enzymes and their inhibitors in potato and Colorado potato beetle tissues] (In Russian)

33. Shevchenko N.D., Ibragimov R.I., Shpirnaya I.A., Umarov I.A., Khamadaliev R.F. Aktivnost' komponentov sistemy «Esterazy – ingibitory esteraz koloradskogo zhuka» v tkanyakh kartofelya. Vestnik Bashkirskogo gosudarstvennogo universiteta. 2008. № 3(1). S. 922−925. [Activity of the components of the system "Esterases - esterase inhibitors of the Colorado potato beetle" in potato tissues] (In Russian)

34. Shpirnaya I.A. Gidroliticheskie fermenty i ikh ingibitory kak komponenty sistemy "nasekomoe-fitofag-rastenie": avtoreferat dis. ... kandidata biologicheskikh nauk: 03.00.12. Ufa. 2006. 24 s. [Hydrolytic enzymes and their inhibitors as components of the "insect-phytophageplant" system] (In Russian)

35. Shpirnaya I.A., Akhatova A.R., Tsvetkov V.O., Yarullina L.M., Artem'eva M.A., Ibragimov R.I. Immunostimuliruyushchii effekt preparatovbioregulyatorov pri obrabotke klubnei kartofelya. Izvestiya Samarskogo nauchnogo tsentra Rossiiskoi akademii nauk. 2011. T. 13. № 5 (3). S. 221−224. [Immunostimulating effect of bioregulatory drugs in the treatment of potato tubers] (In Russian)

36. Shpirnaya I.A., Umarov I.A., Shevchenko N.D., Ibragimov R.I. Opredelenie aktivnosti gidrolaz i ikh ingibitorov po gidrolizu substrata v gele agarozy. Prikladnaya biokhimiya i mikrobiologiya. 2009. T.45(4). C.497−501. [Determination of the activity of hydrolases and their inhibitors for substrate hydrolysis in agarose gel] (In Russian)

37. Shpirnaya I.A., Umarov I.A., Shevchenko N.D., Ibragimov R.I. Podavlenie aktivnosti gidroliticheskikh fermentov lichinok koloradskogo zhuka ingibitorami iz rastitel'nykh tkanei. Vyatskii meditsinskii vestnik. № 4. 2007. S.200−202. [Suppression of the activity of hydrolytic enzymes of Colorado potato beetle larvae by inhibitors from plant tissues] (In Russian)

38. Shpirnaya I.A., Umarov I.A., Shevchenko N.D., Yakhin O.I., Ibragimov R.I. Stimulirovanie estestvennykh mekhanizmov ustoichivosti v tkanyakh kartofelya pod vliyaniem bioregulyatorov. Vestnik Orenburgskogo gosudarstvennogo universiteta. № 75. 2007. S.359−361. [Stimulation of natural mechanisms of resistance in potato tissues under the influence of bioregulators] (In Russian)

39. Tsvetkov V.O. Gidroliticheskie fermenty i ikh belkovye ingibitory kak komponenty vzaimodeistviya kartofelya s koloradskim zhukom : avtoreferat dis. ... kandidata biologicheskikh nauk: 03.01.05, 03.02.08. Ufa. 2011. 16 s. [Hydrolytic enzymes and their protein inhibitors as components of the interaction of potatoes with the Colorado potato beetle] (In Russian)

40. Tsvetkov V.O., Ryabtseva N.D., Shpirnaya I.A., Basyrova A.M., Valiakhmetova K.I., Ibragimov R.I. Vydelenie i kharakteristika proteoliticheskikh fermentov lichinok koloradskogo zhuka. Izvestiya Samarskogo nauchnogo tsentra Rossiiskoi akademii nauk. 2011. T. 13. № 5(3). S. 120-124. [Isolation and characterization of proteolytic enzymes of Colorado potato beetle larvae] (In  Russian)

41. Tsvetkov V.O., Shpirnaya I.A., Ibragimov R.I. Servis prosmotra i analiza struktury biomolekul. Svidetel'stvo o registratsii programmy dlya EVM RU 2016615885, 01.06.2016. Zayavka № 2016612978 ot 04.04.2016. [Service for viewing and analyzing the structure of biomolecules] (In Russian)

42. Tsvetkov V.O., Shpirnaya I.A., Maksutova V.O. Instrument opredeleniya gidroliticheskoi aktivnosti po gidrolizu substrata v poliakrilamidnom gele. Svidetel'stvo o registratsii programmy dlya EVM RU 2018611900. 08.02.2018. [A tool for determining hydrolytic activity by hydrolysis of a substrate in a polyacrylamide gel] (In Russian)

43. Tsvetkov V.O., Shpirnaya I.A., Maksutova V.O. Sposob kolichestvennogo opredeleniya proteoliticheskoi aktivnosti fermentov po gidrolizu substrata, immobilizovannogo v poliakrilamidnom gele. Patent na izobretenie RU 2701734 C1. 01.10.2019. [A method for
quantitative determination of the proteolytic activity of enzymes by hydrolysis of a substrate immobilized in a polyacrylamide gel] (In Russian)

44. Tsvetkov V.O., Shpirnaya I.A., Maksutova V.O. Sposob kolichestvennogo opredeleniya amiloliticheskoi aktivnosti fermentov po gidrolizu substrata, immobilizovannogo v poliakrilamidnom gele. Patent na izobretenie RU 2708087 C2. 04.12.2019. [A method for
quantitative determination of the amylolytic activity of enzymes by hydrolysis of a substrate immobilized in a polyacrylamide gel] (In Russian)

45. Tsvetkov V.O., Shpirnaya I.A., Maksutova V.O., Ibragimov R.I. Opredelenie aktivnosti amilaz i proteaz s ispol'zovaniem substratov, immobilizovannykh v polikrilamidnom gele. Izvestiya Ufimskogo nauchnogo tsentra Rossiiskoi akademii nauk. 2018. № 3-5. S. 81−85. [Determination of the activity of amylases and proteases using substrates immobilized in polycrylamide gel] (In Russian)

46. Umarov I.A. Ekologicheskie i fiziologobiokhimicheskie zakonomernosti vzaimootnoshenii v sisteme "kartofel'-koloradskii zhuk": avtoreferat dis. ... kandidata biologicheskikh nauk: 03.00.12, 03.00.16. Ufa. 2009. 24 s. [Ecological and physiological-biochemical
patterns of relationships in the "potato-Colorado potato beetle" system] (In Russian)

47. Umarov I.A., Mardanshin I.S., Ben'kovskaya G.V., Ibragimov R.I. Ekologo-fiziologicheskaya kharakteristika rezistentnykh i chuvstvitel'nykh k insektitsidam populyatsii koloradskogo zhuka na Yuzhnom Urale. Vestnik Orenburgskogo gosudarstvennogo universiteta. 2007. № 75. S. 359−361. [Ecological and physiological characteristics of insecticide-resistant and insecticide-sensitive populations of the Colorado potato beetle in the Southern Urals] (In Russian)

48. Yakhin I.A., Ibragimov R.I., Yakhin O.I., Isaev R.F., Vakhitov V.A. Indutsirovannoe deistvie biopreparata stifun na nakoplenie ingibitorov tripsina v klubnyakh kartofelya pri khranenii. Doklady Rossiiskoi akademii sel'skokhozyaistvennykh nauk. 1998. № 3. S.
12−13. [Induced action of the biological product Styphun on the accumulation of trypsin inhibitors in potato tubers during storage] (In Russian)

49. Yakhin O.I., Lubyanov A.A., Kalimullina Z.F., Yakhin I.A., Batraev R.A., Ryabtseva N.D., Shpirnaya I.A., Ibragimov R.I. Vliyanie biostimulyatora «stifun» na aktivnost' gidroliticheskikh fermentov i ikh ingibitorov u rastenii pshenitsy pri deistvii abioticheskikh stressovykh faktorov. Agrokhimiya. 2017. № 9. S. 63−74. DOI: 10.7868/S0002188117090071. [Influence of the biostimulator "stiphun" on the activity of hydrolytic enzymes and their inhibitors in wheat plants under the action of abiotic stress factors] (In Russian)

50. Yakhin O.I., Lubyanov A.A., Yakhin I.A., Vakhitov V.A., Ibragimov R.I., Yumaguzhin M.S., Kalimullina Z.F. Metabolicheskie izmeneniya u rastenii pshenitsy (Triticum aestivum L.) pri deistvii bioregulyatora stifuna. Prikladnaya biokhimiya i mikrobiologiya. 2011. T. 47(6). S. 679−684. [Under the action of the bioregulator Styphun] (In Russian)

51. Yanchevskaya T.G., Grits A.N., Kolomiets E.I., Romanovskaya T.V., Yarullina L.G., Ibragimov R.I., Tsvetkov V.O. Stimulirovanie kletochnykh mekhanizmov antivirusnoi ustoichivosti kartofelya pri deistvii preparata na osnove bakterii Bacillus subtilis. Prikladnaya biokhimiya i mikrobiologiya. 2018. T. 54(3). S. 304–312. DOI: 10.7868/S0555109918030108. [Stimulation of the cellular mechanisms of antiviral resistance of potatoes under the action of a preparation based on the bacteria Bacillus subtilis] (In Russian)

52. Yarullina L.G. Ibragimov R.I. Osnovy DNKdiagnostiki infektsionnykh boleznei rastenii (uchebnometodicheskoe posobie). Ufa: RITs BashGU. 2016. 48 s. [Fundamentals of DNA diagnostics of infectious plant diseases (teaching aid)] (In Russian)

53. Yarullina L.G. Ibragimov R.I., Tsvetkov V.O., Yarullina L.M., Shpirnaya I.A. Tsitokhimicheskie i biokhimicheskie metody issledovaniya mikroorganizmov – vozbuditelei boleznei rastenii (uchebnoe posobie). Ufa: RITs BashGU. 2016. 92 s. [Cytochemical and biochemical methods for the study of microorganisms - causative agents of plant diseases (textbook)] (In Russian)

54. Yarullina L.G., Ibragimov R.I. Kletochnye mekhanizmy formirovaniya ustoichivosti rastenii k gribnym patogenam. Ufa: Gilem. 2006. 232 s. [Cellular mechanisms of the formation of plant resistance to fungal pathogens] (In Russian)

55. Yarullina L.G., Ibragimov R.I., Akhmetov R.R. Gormonal'nyi balans u pshenitsy, porazhennoi vozbuditelem kornevoi gnili Helminthosporium sativum. Izvestiya Rossiiskoi akademii nauk. Seriya biologicheskaya. 2001. № 4. S. 499−502. [Hormonal balance in wheat affected by the root rot pathogen Helminthosporium sativum] (In Russian)

56. Yarullina L.G., Ibragimov R.I., Maksimov I.V., Akhmetov R.R. Zashchitnye reaktsii pshenitsy pri porazhenii kornevoi gnil'yu. Doklady Rossiiskoi akademii sel'skokhozyaistvennykh nauk. 1999. № 4. S. 8−9. [Wheat defense reactions in case of root rot damage] (In Russian)

57. Yarullina L.G., Ibragimov R.I., Shpirnaya I.A., Burkhanova G.F., Sorokan A.V., Tsvetkov V.O. Yanchevskaya T.G., Grits A.N., Kolomiets E.I., Romanovskaya T.V. The activity of hydrolases and their protein inhibitors in potato tissues at Phytophthora infestans infection and stability inductors processing. Research Journal of Pharmaceutical Biological and Chemical Sciences. 2018. № 9(3). P. 1042−1048.

58. Yarullina L.G., Ibragimov R.I., Shpirnaya I.A.,Tsvetkov V.O., Umarov I.A., Maksimov I.V. Biokhimicheskie faktory razvitiya ustoichivosti rastenii k patogenam. Sovremennye naukoemkie tekhnologii. 2010. № 4. S. 46−48. [Biochemical factors in the development of plant resistance to pathogens] (In Russian)

59. Yarullina L.G., Kasimova R. I., Ibragimov R.I., Umarov I. A., Maksimov I. V. Kachestvennye i kolichestvennye izmeneniya proteoma klubnei kartofelya pod vozdeistviem signal'nykh molekul i infitsirovaniya Phytophthora infestans. Prikladnaya biokhimiya i
mikrobiologiya. 2016. T. 52(1). S. 85−93. DOI:10.7868/S0555109916010153. [Qualitative and quantitative changes in the proteome of potato tubers under the influence of signaling molecules and infection with Phytophthora infestans] (In Russian)

60. Yarullina L.G., Kasimova R. I., Kuluev B. R., Surina O. B., Yarullina L.M., Ibragimov R.I. Comparative study of bunt pathogen resistance to the effects of fungicides in callus co-cultures Triticum aestivum with Tilletia caries. Agricultural Sciences. 2014. V. 5(10). P. 906−912. DOI:10.4236/as.2014.510098.

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