eISSN: 2221-6197 DOI: 10.31301/2221-6197

Obtaining an aptasensors for quantification of oxytetracycline

Year: 2019

Pages: 158-166

Number: Volume 11, issue 2

Type: scientific article

Summary:

An actual task is to develop a quick and affordable way to quantify the residual amounts of pollutants in food, e.g. antibiotics in honey. A DNA-aptasensor was created to determine the concentration of oxytetracycline in aqueous solutions in range from 1 to 100 ppm using a screen printed electrode and affordable electronic components. The aptamers were obtained by systematic evolution of ligands by exponential enrichment (SELEX) from a library of sequences containing 50 random nucleotides flanked by 20-nucleotide sequences for primer annealing. To perform SELEX, the oxytetracycline was immobilized on the microparticles of 40% polyacrylamide gel. There were performed 5 rounds of SELEX, including DNA annealing on immobilized oxytetracycline, washing microparticles of unbound DNA by centrifugation, elution of bound DNA by heating and subsequent PCR. Aptamers containing aminolink at the 5’end were immobilized on the screen surface of printed electrode. The direct nonlinear relationship between the aptasensor response and the oxytetracycline concentration in the range of 1-100 ppm with a sensitivity of 2.5 to 0.02 µS/ppm was shown by conductometry. The method of cyclic voltammetry shows the linear relationship between anode peak value and decimal logarithm of the oxytetracycline concentration in the range of 1-100 ppm.

Keywords:

determination of antibiotic concentration; oxytetracycline; biosensors; aptamers; SELEX

References:

  1. Chen D., Yao D., Xie C., Liu D. Development of an aptasensor for electrochemical detection of tetracycline. Food Control. 2014. V. 42. P. 109-115. doi:10.1016/j.foodcont.2014.01.018
  2. Dinkov D., Kanelov I., Zheljazkova I., Vashin I.V. Sohranenie tetraciklina i oksitetraciklina v mede posle nepravil'nogo primenenija jetih antibiotikov v pchelinyh sem'jah. Rossijskij veterinarnyj zhurnal. 2006. №1. S. 42-43. [Keeping of tetracycline and oxytetracycline in honey after improper use of these antibiotics in bee colonies]. (In Russian).
  3. D’Orazio P. Biosensors in clinical chemistry. Clinica Chimica Acta. V. 334(1-2). P. 41-69. doi:10.1016/s0009-8981(03)00241-9
  4. GOST 31903-2012 Produkty pishhevye. Jekspress-metod opredelenija antibiotikov. Vved. 2013-07-01. M.: Standartinform, 2013. 8 s. [Food products. Express method for the determination of antibiotics]. (In Russian). http://vsegost.com/Catalog/53/53615.shtml
  5. GOST R 54655-2011 Med natural'nyj. Metod opredelenija antibiotikov. Vved. 2013-01-01. M.: Standartinform, 2012. 14 s. [Natural honey. Method for the determination of antibiotics] (In Russian). http://vsegost.com/Catalog/51/51671.shtml
  6. Grieshaber D., MacKenzie R., Voros J., Reimhult E. Electrochemical biosensors - sensor principles and architectures. Sensors. 2008. V. 8(3). P. 1400-1458. doi:10.3390/s80314000
  7. Han K., Liang Z., Zhou N. Design strategies for aptamer-based biosensors. Sensors. 2010. V. 10(5). P. 4541-4557. doi:10.3390/s100504541
  8. Irvine D., Tuerk C., Gold L. Systematic evolution of ligands by exponential enrichment with integrated optimization by non-linear analysis. Journal of Molecular Biology. 1991. V. 222(3). P. 739-761. doi:10.1016/0022-2836(91)90509-5
  9. Joshi P.S., Relekar A.S., Sutrave D.S. Development of a cyclic voltammetry system by designing a low cost. International Journal of Current Research. 2017. V. 9. P. 51072-51075.
  10. Kibbe W.A. OligoCalc: an online oligonucleotide properties calculator. Nucleic Acids Research. 2007. V. 35. P. 43-46. doi:10.1093/nar/gkm234
  11. Lakhin A.V., TarantulZ., Gening L.V. Aptamers: problems, solutions and prospects. Acta Naturae. 2013. V. 5(4). P. 34-43.
  12. Mehlhorn A., Rahimi P., Joseph Y. Aptamer-based biosensors for antibiotic detection: A review. Biosensors. 2018. V. 8(2). P. 54. doi:10.3390/bios8020054
  13. Meloni G.N. Building a microcontroller based potentiostat: a inexpensive and versatile platform for teaching electrochemistry and instrumentation. Journal of Chemical Education. 2016. V. 93(7). P. 1320-1322. doi:10.1021/acs.jchemed.5b00961
  14. Mercier M.C., Dontenwill M., Choulier L. Selection of nucleic acid aptamers targeting tumor cell-surface protein biomarkers. 2017. V. 9(6). doi:10.3390/cancers9060069
  15. Mishra G., Barfidokht A., Tehrani F., Mishra R. Food safety analysis using electrochemical biosensors. Foods. 2018. V. 7(9). P. 141. doi:10.3390/foods7090141
  16. Mulyasuryani A., Prasetyawan S. Organophosphate hydrolase in conductometric biosensor for the detection of organophosphate pesticides. Analytical Chemistry Insights. 2015. V. 10. P. 23-27. doi:10.4137/aci.s30656
  17. Ruscito A., DeRosa M.C. Small-molecule binding aptamers: selection strategies, characterization, and applications. Frontiers in Chemistry. 2016. V. 4. Article. 14. doi:10.3389/fchem.2016.00014
  18. Syed M.A., Pervaiz S. Advances in aptamers // Oligonucleotides. 2010. V. 20(5). P. 215-224. doi:10.1089/oli.2010.0234
  19. Thevenot D.R., Toth K., Durst R.A., Wilson G.S. Electrochemical biosensors: recommended definitions and classification. Biosensors Bioelectronics. 2001. V. 16(1-2). P. 121-131. doi:10.1016/s0956-5663(01)00115-4
  20. Viswanathan S., Radecka H., Radecki J. Electrochemical biosensors for food analysis. Monatshefte fuer Chemie. Chemical Monthly. 2009. V. 140(8). P. 891-899. doi:10.1007/s00706-009-0143-5
  21. Yang X., Li N., Gorenstein D.G. Strategies for the discovery of therapeutic aptamers. Expert Opinion on Drug Discovery. 2010. V. 6(1). P. 75-87. doi:10.1517/17460441.2011.537321
  22. Zhang W., Asiri A.M., Liu D., Du D., Lin Y. Nanomaterial-based biosensors for environmental and biological monitoring of organophosphorus pesticides and nerve agents. TrAC Trends in Analytical Chemistry. 2014. V. 54. P. 1-10. doi:10.1016/j.trac.2013.10.007
  23. Zhou J., Rossi J. Aptamers as targeted therapeutics: current potential and challenges. Nature Reviews Drug Discovery. 2016. V. 16(3). P. 181-202. doi:10.1038/nrd.2016.199
  24. Zhu X., Shi L. Nano-inspired biosensors for protein assay with clinical applications. Electrochemistry. 2019. P. 209-236. doi:10.1016/b978-0-12-815053-5.00009-x
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eISSN: 2221-6197 DOI: 10.31301/2221-6197